I-TASSER results

I-TASSER results for job id Rv2618

[Click on result.tar.bz2 to download the tarball file including all modelling results listed on this page]

Input Sequence in FASTA format

>protein (225 residues)
MDPVRRQLYQFVCSQSMPVSRDQAADAVGIPRHQAKFHLDRLTAEGLLDTEYARLTGRSG
PGAGRTAKLYRRAGRDIALSLPQREYELAGRLMAAAIVLSATTGEPTVEVLNRIAHDYGQ
AMGAAATTRPPADPAAALELTLDVLRKYGYEPRRPAGPGDDEVELVNCPFHALAREQTEL
ACNMNHALITGVADALAPHSPAVRLAPGPARCCVVLKRCSAHDPE

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 180 200 220 \| \| \| \| \| \| \| \| \| \| \| MDPVRRQLYQFVCSQSMPVSRDQAADAVGIPRHQAKFHLDRLTAEGLLDTEYARLTGRSGPGAGRTAKLYRRAGRDIALSLPQREYELAGRLMAAAIVLSATTGEPTVEVLNRIAHDYGQAMGAAATTRPPADPAAALELTLDVLRKYGYEPRRPAGPGDDEVELVNCPFHALAREQTELACNMNHALITGVADALAPHSPAVRLAPGPARCCVVLKRCSAHDPE
Prediction	CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEHCCCCCCCCCCCCCCEEEEHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHCCCCEEEEEHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHCCCCEEEEEEHCCCCCCCC
Conf.Score	989999999999995999999999999899999999999999998996899864667788899998568997444566658876699999999999999856775799999999999999999887655789999999999999999899768998599679999688799999988599999999999999987588678999856898799999668898999
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 180 200 220 \| \| \| \| \| \| \| \| \| \| \| MDPVRRQLYQFVCSQSMPVSRDQAADAVGIPRHQAKFHLDRLTAEGLLDTEYARLTGRSGPGAGRTAKLYRRAGRDIALSLPQREYELAGRLMAAAIVLSATTGEPTVEVLNRIAHDYGQAMGAAATTRPPADPAAALELTLDVLRKYGYEPRRPAGPGDDEVELVNCPFHALAREQTELACNMNHALITGVADALAPHSPAVRLAPGPARCCVVLKRCSAHDPE
Prediction	866214300510373744131430074171335002400430274320334435455455522110332031145326441254114200310341044346445412420452045115413542474665424400430140047231203245575422010111002400651252014103300420054245543323036364302030344656648
	Values range from 0 (buried residue) to 8 (highly exposed residue)

Predicted Normalized B-facotr

(B-factor is a value to indicate the extent of the inherent thermal mobility of residues/atoms in proteins. In I-TASSER, this value is deduced from threading template proteins from the PDB in combination with the sequence profiles derived from sequence databases. The reported B-factor profile in the figure below corresponds to the normalized B-factor of the target protein, defined by B=(B'-u)/s, where B' is the raw B-factor value, u and s are respectively the mean and standard deviation of the raw B-factors along the sequence. (Click here to read more about predicted normalized B-factor)

Top 10 threading templates used by I-TASSER

Rank

PDB
Hit

Iden1

Iden2

Cov

Norm.
Zscore

Download
Align.

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220

                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |

Sec.Str
Seq

CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEHCCCCCCCCCCCCCCEEEEHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHCCCCEEEEEHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHCCCCEEEEEEHCCCCCCCC
MDPVRRQLYQFVCSQSMPVSRDQAADAVGIPRHQAKFHLDRLTAEGLLDTEYARLTGRSGPGAGRTAKLYRRAGRDIALSLPQREYELAGRLMAAAIVLSATTGEPTVEVLNRIAHDYGQAMGAAATTRPPADPAAALELTLDVLRKYGYEPRRPAGPGDDEVELVNCPFHALAREQTELACNMNHALITGVADALAPHSPAVRLAPGPARCCVVLKRCSAHDPE

4a6dA

0.10

0.09

0.93

0.79

MUSTER

LG-----VFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGK-----------AFYRNTELSSDYLTTPTSQCSMLKYMGRTSYRCWGHLADAVREQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSLTAFDLSVFPLMCDLGGLAKECMSLYPGCITVFDIPEVVWTAKQHFSFEEQIDFQEGDEADLYILARVLHDWAD

4nb5A

0.10

0.05

0.56

0.76

dPPAS

LTRLAGRLLGWLLVCDPEQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRR---------TYFRLRPNAFAAGERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQ-------------------------------------------------------------------------------------------

1ulyA

0.10

0.07

0.70

1.16

wdPPAS

LEDTRRKILKLLRN---KETISQLSEILGKTPQTIYHHIEKLKEAGLVEVKRTEKGNLVE-------KYYGRTADVFYINLYLYIARSRLKTKIDIFKRLGYQFEDRSQKEFDATVRISKYIEEKEDALKDFS-NEDIIHAIEWLSTA----ELARDE----------EYLELLKRLGSIL-K------------------------------------------

2p4wB

0.12

0.09

0.77

1.05

wMUSTER

LNETRRRILFLLTK--RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPR------GRPRKYYMIKKGGSEMYEAKGVRKSPEYEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKRE--LEEARILIETYIENT--MRRLAEENRQ--------IIEEIFRDIEKIL----PGYARSLKEKFL----------------------------

2p4wB

0.13

0.10

0.74

1.33

wPPAS

LNETRRRILFLLTK--RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEK------IPRGRPRKYYMIKKEMYEAKGVRKS---PEYEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKR--ELEEARILIETYIENT-------------RLAEEN-IIEEIFRDIEKILPGYARSLKEKFL--------------------------------

4nb5A

0.12

0.07

0.56

1.36

dPPAS2

LTRLAGRLLGWLLVCDPEQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRR---------TYFRLRPNAFAAGERIRAMAELQDLADVGLRALGDA-PPQRSRRLREMRDLLAYMENVVSD-----ALGRYSQ-------------------------------------------------------------------------------------

2p4wB

0.13

0.10

0.74

1.07

PPAS

LNETRRRILFLLTK--RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEK------IPRGRPRKYYMIKKEMYEAKGVRK-----SPEYEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKRELEEARILIETYIENT-AEENRQIIEE---------IFRDIEKLPPGYARSLKEKFL------------------------------------

2p4wB

0.12

0.09

0.77

1.35

Env-PPAS

LNETRRRILFLLTK--RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKI------PRGRPRKYYMIKKGSEMYEAKGVRKSPEYEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKRELEEARILIETYIENTMRRLAEENRQ-------------IIEEIFRDIEKIL---PPGYARSLKEKFL----------------------------

4p96A

0.10

0.09

0.92

0.74

MUSTER

PGFAEKYIIESIWNGRFPPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTQFMETSGLHIL-------DTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLNKESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKD---------ELKRQEILIAKTFNFYDYMLFQRLAFHSGNQ-IYGLIFNGLKKLYDRVGSYYFSNPQ

1ulyA

0.09

0.07

0.72

0.76

dPPAS

LEDTRRKILKLLRN---KETISQLSEILGKTPQTIYHHIEKLKEAGLVEVKRTEKGNLVEKYYGRTADVFYINLYLGDEEL-RYIARSRLKTKIDIFKRLGYQFEDRSQKEFDATVRISKYIEEKEDALKDFSNEDIIHAIEWLSTAE-----LARDE----------EYLELLKRLGSILK-------------------------------------------

(a)	Iden1 is the number of template residues identical to query divided by number of aligned residues.
(b)	Iden2 is the number of template residues identical to query divided by query sequence length.
(c)	Cov is equal the number of aligned template residues divided by query sequence length.
(d)	Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment.
(e)	Download Align. list the threading program used to identify the template provide the 3D structure of aligned regions of threading templates.

Top 5 final models predicted by I-TASSER

(For each target, I-TASSER simulations generate a large ensemble of structural conformations, called decoys. To select the final models, I-TASSER uses the SPICKER program to cluster all the decoys based on the pair-wise structure similarity, and reports up to five models which corresponds to the five largest structure clusters. The confidence of each model is quantitatively measured by C-score that is calculated based on the significance of threading template alignments and the convergence parameters of the structure assembly simulations. C-score is typically in the range of [-5, 2], where a C-score of higher value signifies a model with a high confidence and vice-versa. TM-score and RMSD are estimated based on C-score and protein length following the correlation observed between these qualities. Since the top 5 models are ranked by the cluster size, it is possible that the lower-rank models have a higher C-score in rare cases. Although the first model has a better quality in most cases, it is also possible that the lower-rank models have a better quality than the higher-rank models as seen in our benchmark tests. If the I-TASSER simulations converge, it is possible to have less than 5 clusters generated. This is usually an indication that the models have a good quality because of the converged simulations.)

More about C-score

Local structure accuracy of first model

Download Model 1

C-score=-3.49

Estimated TM-score = 0.33±0.11

Estimated RMSD = 13.9±3.9Å

Download Model 2

C-score=-4.09

Download Model 3

C-score=-4.07

Download Model 4

C-score=-4.21

Download Model 5

C-score=-4.17

Proteins structureally close to the target in PDB (as identified by TM-align

(After the structure assembly simulation, I-TASSER uses the TM-align structural alignment program to match the first I-TASSER model to all structures in the PDB library. This section reports the top 10 proteins from the PDB that have the closest structural similarity, i.e. the highest TM-score, to the predicted I-TASSER model. Due to the structural similarity, these proteins often have similar function to the target. However, users are encouraged to use the data in the next section 'Predicted function using COACH' to infer the function of the target protein, since COACH has been extensively trained to derive biological functions from multi-source of sequence and structure features which has on average a higher accuracy than the function annotations derived only from the global structure comparison.)

Top 10 Identified stuctural analogs in PDB

Rank	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov
1	2p4wB	0.700	2.03	0.115	0.773
2	1st6A	0.467	5.30	0.063	0.733
3	4kxfK	0.461	5.18	0.057	0.733
4	3wajA1	0.450	5.39	0.070	0.733
5	3fahA	0.449	5.83	0.062	0.760
6	4aq7A	0.447	6.05	0.084	0.822
7	4m0mA	0.444	5.64	0.044	0.756
8	4ff1A	0.442	5.84	0.048	0.764
9	3kvnX	0.442	5.99	0.048	0.791
10	3rceA	0.441	5.73	0.051	0.756

(a)	Query structure is shown in cartoon, while the structural analog is displayed using backbone trace.
(b)	Ranking of proteins is based on TM-score of the structural alignment between the query structure and known structures in the PDB library.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted function using COACH

(This section reports biological annotations of the target protein by COACH based on the I-TASSER structure prediction. COACH is a meta-server approach that combines multiple function annotation results from the COFACTOR, TM-SITE and S-SITE programs.)

Ligand binding sites

Rank	C-score	Cluster size	PDB Hit	Lig Name	Download Complex	Ligand Binding Site Residues
1	0.06	3	4omyD	NUC	Rep, Mult	2,5,30,31,33,37,38,41
2	0.06	3	1hbnA	UUU	Rep, Mult	36,39,42,49
3	0.06	3	4on0B	NUC	Rep, Mult	2,4,5,31,33,34,37,38,52,54,66
4	0.04	2	2e0aA	MG	Rep, Mult	179,183
5	0.04	2	1sijA	FES	Rep, Mult	8,22,23,24,25,32,35
6	0.04	2	1hbmA	NA	Rep, Mult	25,28,29,30,31
7	0.04	2	5ccgC	CA	Rep, Mult	143,146
8	0.04	2	4clvA	ZN	Rep, Mult	139,143
9	0.02	1	4f8hA	LMD	Rep, Mult	121,124
10	0.02	1	2zcpA	MG	Rep, Mult	22,26
11	0.02	1	2qb0B	MN	Rep, Mult	45,64
12	0.02	1	2g02A	ZN	Rep, Mult	168,212,222
13	0.02	1	2iefB	NUC	Rep, Mult	64,65
14	0.02	1	1y66A	DIO	Rep, Mult	4,8

	Download the all possible binding ligands and detailed prediction summary.
	Download the templates clustering results.
(a)	C-score is the confidence score of the prediction. C-score ranges [0-1], where a higher score indicates a more reliable prediction.
(b)	Cluster size is the total number of templates in a cluster.
(c)	Lig Name is name of possible binding ligand. Click the name to view its information in the BioLiP database.
(d)	Rep is a single complex structure with the most representative ligand in the cluster, i.e., the one listed in the Lig Name column. Mult is the complex structures with all potential binding ligands in the cluster.

Enzyme Commission (EC) numbers and active sites

Rank	Cscore^EC	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	EC Number	Active Site Residues
1	0.060	1crlA	0.401	5.97	0.046	0.716	3.1.1.3	NA
2	0.060	1mpxA	0.407	5.95	0.056	0.707	3.2.1.43	NA
3	0.060	3kvnX	0.442	5.99	0.048	0.791	3.1.1.1	NA
4	0.060	1pgjA	0.404	5.38	0.041	0.644	1.1.1.44	45
5	0.060	1rqgA	0.408	6.27	0.037	0.756	6.1.1.10	56
6	0.060	2vn4A	0.409	5.81	0.067	0.689	3.2.1.3	151
7	0.060	2vn7A	0.404	6.06	0.051	0.720	3.2.1.3	38
8	0.060	1wz2A	0.422	5.80	0.076	0.747	6.1.1.4	NA
9	0.060	3gf7A	0.410	5.74	0.083	0.689	4.1.1.70	NA
10	0.060	1e6yA	0.420	5.02	0.061	0.684	2.8.4.1	NA
11	0.060	1ileA	0.415	5.98	0.051	0.747	6.1.1.5	NA
12	0.060	1pixA	0.412	6.00	0.075	0.729	4.1.1.70	NA
13	0.060	1gaxA	0.413	6.26	0.055	0.769	6.1.1.9	NA
14	0.060	1lpsA	0.406	5.73	0.045	0.698	3.1.1.3	NA
15	0.060	1vlbA	0.449	5.79	0.062	0.760	1.2.99.7	14
16	0.060	1iq8A	0.436	5.84	0.052	0.751	2.4.2.29	NA
17	0.060	1h19A	0.408	6.05	0.026	0.711	3.3.2.6	11
18	0.060	2o6yA	0.431	5.45	0.042	0.689	4.3.1.-	NA
19	0.060	1gz7A	0.404	5.94	0.051	0.716	3.1.1.3	NA

(a)	Cscore^EC is the confidence score for the EC number prediction. Cscore^EC values range in between [0-1]; where a higher score indicates a more reliable EC number prediction.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

Gene Ontology (GO) terms

Rank	Cscore^GO	TM-score	RMSD^a	IDEN^a	Cov	PDB Hit	Associated GO Terms
Homologous GO templates in PDB
0	0.21	0.700	2.03	0.12	0.77	2p4wB	GO:0003677 GO:0003700 GO:0006351 GO:0006355
1	0.07	0.467	5.30	0.06	0.73	1st6A	GO:0001725 GO:0002009 GO:0002162 GO:0003779 GO:0005198 GO:0005623 GO:0005737 GO:0005743 GO:0005856 GO:0005886 GO:0005903 GO:0005911 GO:0005912 GO:0005913 GO:0005915 GO:0005916 GO:0005925 GO:0005927 GO:0007155 GO:0008013 GO:0015629 GO:0016020 GO:0017166 GO:0030018 GO:0030032 GO:0030054 GO:0030334 GO:0030486 GO:0031594 GO:0031625 GO:0034333 GO:0034394 GO:0042383 GO:0042803 GO:0043034 GO:0043234 GO:0043297 GO:0045121 GO:0045294 GO:0045296 GO:0048675 GO:0051015 GO:0051371 GO:0051393 GO:0070062 GO:0070527 GO:0090136 GO:0090636 GO:0090637 GO:0097110 GO:0098723 GO:1903561 GO:1990357
2	0.06	0.369	5.65	0.03	0.60	2x0lA	GO:0000122 GO:0000784 GO:0000790 GO:0001085 GO:0001701 GO:0002039 GO:0003677 GO:0003682 GO:0003700 GO:0004407 GO:0005634 GO:0005654 GO:0005667 GO:0006351 GO:0006355 GO:0006357 GO:0006482 GO:0007275 GO:0007596 GO:0008134 GO:0008283 GO:0010569 GO:0010725 GO:0016491 GO:0016568 GO:0016575 GO:0019899 GO:0021983 GO:0030374 GO:0030851 GO:0032091 GO:0032451 GO:0032452 GO:0032453 GO:0032454 GO:0033169 GO:0033184 GO:0034644 GO:0034648 GO:0034720 GO:0042162 GO:0043234 GO:0043392 GO:0043426 GO:0043433 GO:0043518 GO:0044212 GO:0045648 GO:0045654 GO:0045892 GO:0045944 GO:0046886 GO:0050660 GO:0050681 GO:0051091 GO:0051572 GO:0051573 GO:0055001 GO:0055114 GO:0061752 GO:0071480 GO:1902166 GO:1903827 GO:1990391 GO:2000179 GO:2000648
3	0.06	0.382	4.62	0.06	0.56	4p9tA	GO:0005198 GO:0005634 GO:0005737 GO:0005856 GO:0005886 GO:0005912 GO:0005913 GO:0007155 GO:0007275 GO:0007409 GO:0015629 GO:0016020 GO:0016323 GO:0016337 GO:0021942 GO:0030027 GO:0030054 GO:0030154 GO:0030424 GO:0042995 GO:0045296 GO:0048813 GO:0048854 GO:0051015 GO:0051823 GO:0060134 GO:0097481
4	0.06	0.347	4.55	0.06	0.50	4k1nA	GO:0001541 GO:0001669 GO:0005198 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005912 GO:0005913 GO:0005915 GO:0005925 GO:0007015 GO:0007155 GO:0007163 GO:0007406 GO:0007568 GO:0008013 GO:0008584 GO:0014070 GO:0014704 GO:0015629 GO:0016020 GO:0016264 GO:0016342 GO:0016600 GO:0017166 GO:0030027 GO:0030054 GO:0031103 GO:0034613 GO:0042127 GO:0042475 GO:0043066 GO:0043231 GO:0043297 GO:0043627 GO:0044822 GO:0045295 GO:0045296 GO:0045880 GO:0046982 GO:0051015 GO:0051291 GO:0071681 GO:0090136 GO:2000146 GO:2001045 GO:2001240 GO:2001241
5	0.06	0.360	3.69	0.13	0.45	2cweA	GO:0003677 GO:0003700 GO:0006351 GO:0006355 GO:0046982
6	0.06	0.359	6.04	0.04	0.64	4iggB	GO:0001541 GO:0001669 GO:0005198 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005912 GO:0005913 GO:0005915 GO:0005925 GO:0007015 GO:0007155 GO:0007163 GO:0007406 GO:0007568 GO:0008013 GO:0008584 GO:0014070 GO:0014704 GO:0015629 GO:0016020 GO:0016264 GO:0016342 GO:0016600 GO:0017166 GO:0030027 GO:0030054 GO:0031103 GO:0034332 GO:0034613 GO:0042127 GO:0042475 GO:0043066 GO:0043231 GO:0043297 GO:0043627 GO:0044822 GO:0045295 GO:0045296 GO:0045880 GO:0051015 GO:0051149 GO:0051291 GO:0071681 GO:0090136 GO:0098641 GO:2000146 GO:2001045 GO:2001240 GO:2001241
7	0.06	0.303	5.09	0.09	0.44	2di3A	GO:0003677 GO:0003700 GO:0006351 GO:0006355 GO:0046872
8	0.06	0.320	4.92	0.07	0.48	1dowA	GO:0001541 GO:0001669 GO:0005198 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005912 GO:0005913 GO:0005915 GO:0005925 GO:0007015 GO:0007155 GO:0007163 GO:0007406 GO:0007568 GO:0008013 GO:0008584 GO:0014070 GO:0014704 GO:0015629 GO:0016020 GO:0016264 GO:0016342 GO:0016600 GO:0017166 GO:0030027 GO:0030054 GO:0031103 GO:0034613 GO:0042127 GO:0042475 GO:0043066 GO:0043231 GO:0043297 GO:0043627 GO:0044822 GO:0045295 GO:0045296 GO:0045880 GO:0046982 GO:0051015 GO:0051291 GO:0071681 GO:0090136 GO:2000146 GO:2001045 GO:2001240 GO:2001241
9	0.06	0.306	5.01	0.03	0.45	4onsC	GO:0005198 GO:0005634 GO:0005737 GO:0005856 GO:0005886 GO:0005912 GO:0005913 GO:0007155 GO:0007275 GO:0007409 GO:0015629 GO:0016020 GO:0016323 GO:0016337 GO:0021942 GO:0030027 GO:0030054 GO:0030154 GO:0030424 GO:0042995 GO:0045296 GO:0048813 GO:0048854 GO:0051015 GO:0051823 GO:0060134 GO:0097481
10	0.06	0.291	2.61	0.16	0.33	3f6oA	GO:0003677 GO:0003700 GO:0006351 GO:0006355
11	0.06	0.291	2.72	0.12	0.33	1ub9A	GO:0003700 GO:0006355
12	0.06	0.301	2.32	0.22	0.33	3f6vA	GO:0003677 GO:0003700 GO:0006351 GO:0006355
13	0.06	0.290	5.25	0.07	0.47	2h34A	GO:0000166 GO:0004672 GO:0004674 GO:0005524 GO:0005576 GO:0005886 GO:0006468 GO:0009405 GO:0016020 GO:0016021 GO:0016301 GO:0016310 GO:0016740 GO:0043085 GO:0043086 GO:0045717 GO:0046777 GO:0051409
14	0.06	0.287	2.97	0.06	0.33	2x4hC	GO:0003677 GO:0003700 GO:0006355 GO:0046872 GO:0046914 GO:0046983
15	0.06	0.304	4.66	0.13	0.43	2qlzB	GO:0003700 GO:0006355
16	0.06	0.281	4.43	0.06	0.40	1i1gA	GO:0003677 GO:0003700 GO:0005622 GO:0006351 GO:0006355 GO:0043565
17	0.06	0.297	3.39	0.14	0.36	3bddA
18	0.06	0.293	2.35	0.21	0.33	2oqgA	GO:0003677 GO:0003700 GO:0006351 GO:0006355

Consensus prediction of GO terms

Molecular Function	GO:0003676	GO:0001071	GO:0003779	GO:0050839	GO:0032403
GO-Score	0.52	0.52	0.36	0.36	0.36
Biological Processes	GO:2000112	GO:1903506	GO:0010468	GO:0006351	GO:0022610
GO-Score	0.52	0.52	0.52	0.52	0.36
Cellular Component	GO:0071944	GO:0005912	GO:0005911	GO:0005856
GO-Score	0.36	0.36	0.36	0.36

(a)	Cscore^GO is a combined measure for evaluating global and local similarity between query and template protein. It's range is [0-1] and higher values indicate more confident predictions.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.
(f)	The second table shows a consensus GO terms amongst the top scoring templates. The GO-Score associated with each prediction is defined as the average weight of the GO term, where the weights are assigned based on Cscore^GO of the template.

[Click on result.tar.bz2 to download the tarball file including all modelling results listed on this page]

Please cite the following articles when you use the I-TASSER server:
1.	J Yang, R Yan, A Roy, D Xu, J Poisson, Y Zhang. The I-TASSER Suite: Protein structure and function prediction. Nature Methods, 12: 7-8, 2015.
2.	J Yang, Y Zhang. I-TASSER server: new development for protein structure and function predictions, Nucleic Acids Research, 43: W174-W181, 2015.
3.	A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738, 2010.
4.	Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40, 2008.