Threading Zmax Znorm MUSTER 5.79 1.00 dPPAS 6.58 0.71 wdPPAS 7.77 0.84 wMUSTER 6.03 1.04 wPPAS 9.24 1.32 dPPAS2 12.52 1.19 PPAS 8.11 1.16 Env-PPAS 5.41 0.68 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=15546) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -1.22 0.56+-0.15 7.2+-4.2 10856 0.298 model2 -2.65 3361 0.071 model3 -4.83 521 0.008 model4 -5.00 460 0.006 model5 -5.00 274 0.004 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).