Threading Zmax Znorm MUSTER 5.80 1.00 dPPAS 22.22 2.39 wdPPAS 26.90 2.89 wMUSTER 7.15 1.23 wPPAS 13.32 1.90 dPPAS2 46.76 4.45 PPAS 12.29 1.76 Env-PPAS 31.37 3.92 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=6777) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -3.33 0.34+-0.12 16.4+-3.0 731 0.015 model2 -3.55 618 0.012 model3 -4.25 312 0.006 model4 -4.69 201 0.004 model5 -4.99 130 0.003 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).