Threading Zmax Znorm MUSTER 27.69 4.77 dPPAS 56.77 6.10 wdPPAS 94.63 10.17 wMUSTER 37.45 6.46 wPPAS 81.55 11.65 dPPAS2 108.11 10.30 PPAS 65.91 9.42 Env-PPAS 9.79 1.22 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=753) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 2.00 0.99+-0.04 4.1+-2.8 753 1.250 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).