Threading Zmax Znorm MUSTER 4.82 0.83 dPPAS 8.60 0.92 wdPPAS 6.93 0.75 wMUSTER 4.62 0.80 wPPAS 7.44 1.06 dPPAS2 20.52 1.95 PPAS 8.77 1.25 Env-PPAS 6.05 0.76 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=18738) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -4.32 0.26+-0.08 17.5+-2.6 782 0.013 model2 -5.00 390 0.003 model3 -5.00 354 0.005 model4 -5.00 292 0.004 model5 -5.00 278 0.004 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).