Threading Zmax Znorm MUSTER 5.53 0.95 dPPAS 10.05 1.08 wdPPAS 6.89 0.74 wMUSTER 6.19 1.07 wPPAS 5.73 0.82 dPPAS2 16.01 1.53 PPAS 7.82 1.12 Env-PPAS 6.55 0.82 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=3012) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -1.40 0.54+-0.15 10.3+-4.6 2076 0.243 model2 -2.97 545 0.051 model3 -2.17 851 0.113 model4 -4.25 130 0.014 model5 -4.19 36 0.015 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).