I-TASSER results

I-TASSER results for job id Rv0339c

[Click on result.tar.bz2 to download the tarball file including all modelling results listed on this page]

Input Sequence in FASTA format

>protein (832 residues)
MQHRGCKNRGQAYDASVTDSLTEVPPAARRALLELANAPTVPVKVLITGGIGTGKTTVLA
AARDTLRRSGLTVLACPPPDGEPPETALVIDDAQLLTDTELLRLTERVADSRLTVVAAAE
AREHHRALRALTMALERDRPRISLGPLPVAEHLRDCTAGLPFLIHAVSARAQAPAQAAKV
ALIERLRRLDEPTLDTLLMMSLTHELGVSDVAAALGISVTDARGLVDRAHASGLIESSHT
AAFLQSVHDAIAQIVGNAHHHEVETSLLRSQLDISPVSAELALRLAEHGLRDERLADILT
RYAADTRDASVRCARLYRAAVHAGAKGLTVRLADALARTGDCTAAATLADDLLSSPDATE
RAAAVRVAASVAVHDGNTGHAAELFGWLGPHPDTMVSSAATIVFAANGDLATARATLRLK
DAGPPTMAARCARNLAEGLLLTMDQPYPVAMAKLGQAIATEQSLSQVIPDSPAALVTLAA
IHAGDPVRARSVIGRAVRAGADPLFQRRHLLLSGWIKMQEGQLPSASADVAAASAGTHLH
RRDALWAAALQTAISRRTGDIGALQQHWYAAMEALAEYSLDLFALLPLGELWVAAARMRQ
VDQLQHTLDQALTLLDSLGNPALWSNSLHWAGVHAGILANSPESVAPHGQALGAMVAHST
LAQALSDAGRTWLRVLAENVDADEVTAAARSLSHVGLTSDATRLAGQAALQTSDARVSGA
MLQLARDLKLGNDFGEPPSGAGDTEPASGTPPAPRQPPAGSPLSDREREVAELLLLGMPY
RDIGARLFISAKTVEHHVARIRQRLGAGSRSEMLSMLRAMLAPESLTADERR

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MQHRGCKNRGQAYDASVTDSLTEVPPAARRALLELANAPTVPVKVLITGGIGTGKTTVLAAARDTLRRSGLTVLACPPPDGEPPETALVIDDAQLLTDTELLRLTERVADSRLTVVAAAEAREHHRALRALTMALERDRPRISLGPLPVAEHLRDCTAGLPFLIHAVSARAQAPAQAAKVALIERLRRLDEPTLDTLLMMSLTHELGVSDVAAALGISVTDARGLVDRAHASGLIESSHTAAFLQSVHDAIAQIVGNAHHHEVETSLLRSQLDISPVSAELALRLAEHGLRDERLADILTRYAADTRDASVRCARLYRAAVHAGAKGLTVRLADALARTGDCTAAATLADDLLSSPDATERAAAVRVAASVAVHDGNTGHAAELFGWLGPHPDTMVSSAATIVFAANGDLATARATLRLKDAGPPTMAARCARNLAEGLLLTMDQPYPVAMAKLGQAIATEQSLSQVIPDSPAALVTLAAIHAGDPVRARSVIGRAVRAGADPLFQRRHLLLSGWIKMQEGQLPSASADVAAASAGTHLHRRDALWAAALQTAISRRTGDIGALQQHWYAAMEALAEYSLDLFALLPLGELWVAAARMRQVDQLQHTLDQALTLLDSLGNPALWSNSLHWAGVHAGILANSPESVAPHGQALGAMVAHSTLAQALSDAGRTWLRVLAENVDADEVTAAARSLSHVGLTSDATRLAGQAALQTSDARVSGAMLQLARDLKLGNDFGEPPSGAGDTEPASGTPPAPRQPPAGSPLSDREREVAELLLLGMPYRDIGARLFISAKTVEHHVARIRQRLGAGSRSEMLSMLRAMLAPESLTADERR
Prediction	CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHCCCCCCHHHHHHHHHHHHCCCCEEEEEHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEEHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
Conf.Score	9888888887666778888877777557999999876678884899985898877999999999999867578888876567898899997765599999999999986688579998678887765555666766546554567667999999998898899999997578875578999999998599999999999986788899999999899857899999999886646567875467899999998699999999999999999865887599999998668987999999999867766774899999999857998589999999999989868899999999878886567999999999999979989999999986667666656899999998697588999987566788765568999999999998678856799999999875778765566778999999999869999999999999998687568899999999999998998999999999987666675689999999999999979999999999999998754676578889999999999998989999999999999999877764566788899999999879889999999999997555675689999999999875776668999999999876787688999999999997666789999999999987765555666666666545666667777776678999999999999889889999998688999999999999998999999999999997688888887889
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MQHRGCKNRGQAYDASVTDSLTEVPPAARRALLELANAPTVPVKVLITGGIGTGKTTVLAAARDTLRRSGLTVLACPPPDGEPPETALVIDDAQLLTDTELLRLTERVADSRLTVVAAAEAREHHRALRALTMALERDRPRISLGPLPVAEHLRDCTAGLPFLIHAVSARAQAPAQAAKVALIERLRRLDEPTLDTLLMMSLTHELGVSDVAAALGISVTDARGLVDRAHASGLIESSHTAAFLQSVHDAIAQIVGNAHHHEVETSLLRSQLDISPVSAELALRLAEHGLRDERLADILTRYAADTRDASVRCARLYRAAVHAGAKGLTVRLADALARTGDCTAAATLADDLLSSPDATERAAAVRVAASVAVHDGNTGHAAELFGWLGPHPDTMVSSAATIVFAANGDLATARATLRLKDAGPPTMAARCARNLAEGLLLTMDQPYPVAMAKLGQAIATEQSLSQVIPDSPAALVTLAAIHAGDPVRARSVIGRAVRAGADPLFQRRHLLLSGWIKMQEGQLPSASADVAAASAGTHLHRRDALWAAALQTAISRRTGDIGALQQHWYAAMEALAEYSLDLFALLPLGELWVAAARMRQVDQLQHTLDQALTLLDSLGNPALWSNSLHWAGVHAGILANSPESVAPHGQALGAMVAHSTLAQALSDAGRTWLRVLAENVDADEVTAAARSLSHVGLTSDATRLAGQAALQTSDARVSGAMLQLARDLKLGNDFGEPPSGAGDTEPASGTPPAPRQPPAGSPLSDREREVAELLLLGMPYRDIGARLFISAKTVEHHVARIRQRLGAGSRSEMLSMLRAMLAPESLTADERR
Prediction	7544326442432623244224410200130021015223210000000110100010021005103512000010034324521000000000101310020003002120000000001123211011002102231011202214002001210000000010013214322200120010003403410000000000024021300010041335202300310110000123311100100020013102431013001000100251331121001000104010220011012001212211000000010011121230000000000000102201300230142241320010000000000011102101300310221122120000000000001101012004224321221000000000000000011111200200010021021011000100000000000000001101200210031111000000000000000000000110010011013113111000000000000000011010102400420241012120000000000000000000011220140022013003101100000000000000000004114202400400220121110000000000000000222111310120010011031000000000100111111210220031013101111011112112222444344434354543440140022002000331102200430300130012002200110203202000110241242645556657
	Values range from 0 (buried residue) to 8 (highly exposed residue)

Predicted Normalized B-facotr

(B-factor is a value to indicate the extent of the inherent thermal mobility of residues/atoms in proteins. In I-TASSER, this value is deduced from threading template proteins from the PDB in combination with the sequence profiles derived from sequence databases. The reported B-factor profile in the figure below corresponds to the normalized B-factor of the target protein, defined by B=(B'-u)/s, where B' is the raw B-factor value, u and s are respectively the mean and standard deviation of the raw B-factors along the sequence. (Click here to read more about predicted normalized B-factor)

Top 10 threading templates used by I-TASSER

Rank

PDB
Hit

Iden1

Iden2

Cov

Norm.
Zscore

Download
Align.

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360                 380                 400                 420                 440                 460                 480                 500                 520                 540                 560                 580                 600                 620                 640                 660                 680                 700                 720                 740                 760                 780                 800                 820

                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |

Sec.Str
Seq

CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHCCCCCCHHHHHHHHHHHHCCCCEEEEEHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEEHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
MQHRGCKNRGQAYDASVTDSLTEVPPAARRALLELANAPTVPVKVLITGGIGTGKTTVLAAARDTLRRSGLTVLACPPPDGEPPETALVIDDAQLLTDTELLRLTERVADSRLTVVAAAEAREHHRALRALTMALERDRPRISLGPLPVAEHLRDCTAGLPFLIHAVSARAQAPAQAAKVALIERLRRLDEPTLDTLLMMSLTHELGVSDVAAALGISVTDARGLVDRAHASGLIESSHTAAFLQSVHDAIAQIVGNAHHHEVETSLLRSQLDISPVSAELALRLAEHGLRDERLADILTRYAADTRDASVRCARLYRAAVHAGAKGLTVRLADALARTGDCTAAATLADDLLSSPDATERAAAVRVAASVAVHDGNTGHAAELFGWLGPHPDTMVSSAATIVFAANGDLATARATLRLKDAGPPTMAARCARNLAEGLLLTMDQPYPVAMAKLGQAIATEQSLSQVIPDSPAALVTLAAIHAGDPVRARSVIGRAVRAGADPLFQRRHLLLSGWIKMQEGQLPSASADVAAASAGTHLHRRDALWAAALQTAISRRTGDIGALQQHWYAAMEALAEYSLDLFALLPLGELWVAAARMRQVDQLQHTLDQALTLLDSLGNPALWSNSLHWAGVHAGILANSPESVAPHGQALGAMVAHSTLAQALSDAGRTWLRVLAENVDADEVTAAARSLSHVGLTSDATRLAGQAALQTSDARVSGAMLQLARDLKLGNDFGEPPSGAGDTEPASGTPPAPRQPPAGSPLSDREREVAELLLLGMPYRDIGARLFISAKTVEHHVARIRQRLGAGSRSEMLSMLRAMLAPESLTADERR

4c0oA

0.10

0.09

0.95

1.60

MUSTER

LYHDPDPSGKERASFWLGELQRS--VHAWEISDQLLQIRQDVESCYFAAQT---KMKIQTSF-DSHASLRDSLLTHIQNLKDLS-------------PVIVTQLALAIA------DLALQMPSWKGCVQTLVEKYSNDVT--------SLPFLLEIL---TVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRLDSNFMAKLLALLFEV-LQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGYEVVEISFNFWYRLGEHLYKTNDEVIHGIFKAYIQRLLHALARHCQLEPDHEGVPEETDMRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPNPTLVEVLEGVVRLPETVHTAVRYTSIELVGESEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDFNGLLEIARSLDSF--LLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLPTVFLDRLAVIFRHTNPQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPTVTHKQL

4ui9O

0.09

0.07

0.78

1.41

dPPAS

--------------------------------------------------------------------------------------------KDWVTPYKIAVLVLLSEMSRTG-----EGAVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSSVVGLFLRHMILAYSKLSFSQVFKLY---TALQQYFQSDENKKPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRINDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEQQESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQ-YLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQ---VASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSVPLINHL-----------------------------------------------------------------------

4ui9O

0.10

0.08

0.77

1.69

wdPPAS

--------------------------------------------------------------------------------------------KDWVTPYKIAVLVLLSE---------SRTGEGAVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQI------RIKLMAEGE-LKDMEQFFDDLSDSFSGTEPE-RHMILAYSKLSFSQVFKLYTALQQYFQSDENKKPLSQKQAEFFLSQQAKALTPASLQKELNNLLKFNPDFAEAHYLSYLNN-VQDFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAESNDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGQSLVQQRAFAGKTANKLMDALKDSDL--SLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMEQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRL-QYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEA---AIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQ---HQELPSVPLINHL---------------------------------------------------------------------

4ui9O

0.09

0.07

0.77

1.83

wMUSTER

------------------------------------------------------------------------------------------KD--WVTKIAVLVLLSEMSRTGE-------GAVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGT---------EPEVHRHMILAYSKLSFSQVFKLYTALQQYFQSDENKKPLSQKQAEFFLSQQAKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRTANKLMDALKDSDLLHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQ-YLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEA---AIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQ---HQELPSVPLINHL---------------------------------------------------------------------

4ui9O

0.12

0.09

0.75

2.31

wPPAS

------------------------------------------------------------------------------------------KD--WVTPYKIAVLVLLSE---------SRTGEGAVS-------------------------LVERR---NQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQIRIKLMAEG--------------ELKDMEQFFDDLSDS--FSGTEPEVH--VVGLFLRHMISFSQVFKLYTALQQYFQSDKPLSQKQAEFFLS-----QQASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNLRVQDTHSLLHYFDRLILTGAGRSLRYAALNLAALHCRFGHYQQAELALQEA--AQESNDHVCLQHCLSWL-DSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTNKLMDALKDSDLLHKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS--------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNT-EMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFA----LILGIPEQALSLLHM---AIEPILADG------AILDKGRAMFLVAKCQVASAASYD---------------------------QPKKAEALEAAIE---NLNEAKNYFVDIRDVVYFQARLYHTLGTQERNRCAMLFRQLHQELPSVPLINH

4ui9O

0.09

0.07

0.78

2.04

dPPAS2

-----------------------------------------------------------------------------------------------KDKIAVLVLLSEMSRTGE-------GAVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSSVVGLFLRHMILAYSKLSFSQVFKLY---TALQQYFQSDENKKPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRINDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEQQESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQ-YLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQ---VASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQELPSVPLINHL-----------------------------------------------------------------------

4ui9O

0.09

0.07

0.78

2.23

PPAS

--------------------------------------------------------------------------------------------KDWVTKIAVLVLLSEMSRTGE-------GAVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQSDENKKPLSQKQAEFFLSQQAKALTPASLQKELNNLLKFNPDFAEAHYLSYLNNVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRINDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEQQESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS------IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQ-YLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEA---AIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQ---HQELPSVPLINHL---------------------------------------------------------------------

5ifeC

0.10

0.09

0.93

1.55

MUSTER

LPFLKPDDI-QYFDKLLVDVDESEEQKERKIMKLLLKIKNGTPPM---------RKAALRQITDKAREFGGPLFNQILPLLMSPT----------LEDQERHLLVKVIDR-----ILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASAL----------IPSLLPFLKAVCKSSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLQQKVRTISALAIAALAEAATPYGIESFDSVLK-----PLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMARRNYRQL--------VDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPLPQICGTVLWRLNNKSAKQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKIKDLLPRLTPILKN-RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYV----WPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLL-ARKVRDVYWKIYNSIYIGSQDALIAHY---RIYNDDKNTYIR

5ifeC

0.09

0.95

1.18

dPPAS

LPFLKPDDIQYFDKLLVDVDESEEQKERKIMKLLLKIKNGTPPMR---------KAALRQITDKAREFGAGPLFNQILPLLMSPT----------LEDQERHLLVKVIDR-----ILYKLDDLVVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALG---------IPSLLPFLKAVCKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVQKVRTISALAIAALAEAATPYSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV-----MLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYR------QLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYE

1hz4A

0.11

0.05

0.42

1.31

wdPPAS

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMADVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ-PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEEIVLEELNENARSLRLLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQ-----------QLNTLPELEQHRAQRILREIN-----------------------------------------------------

(a)	Iden1 is the number of template residues identical to query divided by number of aligned residues.
(b)	Iden2 is the number of template residues identical to query divided by query sequence length.
(c)	Cov is equal the number of aligned template residues divided by query sequence length.
(d)	Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment.
(e)	Download Align. list the threading program used to identify the template provide the 3D structure of aligned regions of threading templates.

Top 5 final models predicted by I-TASSER

(For each target, I-TASSER simulations generate a large ensemble of structural conformations, called decoys. To select the final models, I-TASSER uses the SPICKER program to cluster all the decoys based on the pair-wise structure similarity, and reports up to five models which corresponds to the five largest structure clusters. The confidence of each model is quantitatively measured by C-score that is calculated based on the significance of threading template alignments and the convergence parameters of the structure assembly simulations. C-score is typically in the range of [-5, 2], where a C-score of higher value signifies a model with a high confidence and vice-versa. TM-score and RMSD are estimated based on C-score and protein length following the correlation observed between these qualities. Since the top 5 models are ranked by the cluster size, it is possible that the lower-rank models have a higher C-score in rare cases. Although the first model has a better quality in most cases, it is also possible that the lower-rank models have a better quality than the higher-rank models as seen in our benchmark tests. If the I-TASSER simulations converge, it is possible to have less than 5 clusters generated. This is usually an indication that the models have a good quality because of the converged simulations.)

More about C-score

Local structure accuracy of first model

Download Model 1

C-score=-1.77

Estimated TM-score = 0.50±0.15

Estimated RMSD = 12.8±4.2Å

Download Model 2

C-score=-2.07

Download Model 3

C-score=-1.20

Download Model 4

C-score=-3.84

Download Model 5

C-score=-3.83

Proteins structureally close to the target in PDB (as identified by TM-align

(After the structure assembly simulation, I-TASSER uses the TM-align structural alignment program to match the first I-TASSER model to all structures in the PDB library. This section reports the top 10 proteins from the PDB that have the closest structural similarity, i.e. the highest TM-score, to the predicted I-TASSER model. Due to the structural similarity, these proteins often have similar function to the target. However, users are encouraged to use the data in the next section 'Predicted function using COACH' to infer the function of the target protein, since COACH has been extensively trained to derive biological functions from multi-source of sequence and structure features which has on average a higher accuracy than the function annotations derived only from the global structure comparison.)

Top 10 Identified stuctural analogs in PDB

Rank	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov
1	5ifeC	0.875	3.05	0.086	0.945
2	5lqwQ	0.705	5.50	0.077	0.876
3	2x1gF	0.649	6.46	0.056	0.870
4	4c0oA	0.622	6.63	0.066	0.843
5	3ea5B	0.603	5.77	0.072	0.760
6	3icqT	0.601	6.79	0.055	0.828
7	5dlqB	0.598	6.67	0.077	0.804
8	1wa5C	0.597	6.34	0.047	0.788
9	1u6gC	0.591	5.83	0.065	0.752
10	4fgvA	0.584	6.49	0.043	0.779

(a)	Query structure is shown in cartoon, while the structural analog is displayed using backbone trace.
(b)	Ranking of proteins is based on TM-score of the structural alignment between the query structure and known structures in the PDB library.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted function using COACH

(This section reports biological annotations of the target protein by COACH based on the I-TASSER structure prediction. COACH is a meta-server approach that combines multiple function annotation results from the COFACTOR, TM-SITE and S-SITE programs.)

Ligand binding sites

Rank	C-score	Cluster size	PDB Hit	Lig Name	Download Complex	Ligand Binding Site Residues
1	0.05	3	1z2nX	MG	Rep, Mult	91,92
2	0.03	2	3ay0B	ZN	Rep, Mult	261,264
3	0.03	2	1a8aA	CA	Rep, Mult	793,795
4	0.02	1	2o1uA	MG	Rep, Mult	764,767
5	0.02	1	3kziX	CLA	Rep, Mult	774,777
6	0.02	1	2z66A	UUU	Rep, Mult	227,229,262,269
7	0.02	1	5ej1B	XP5	Rep, Mult	485,488
8	0.02	1	1xrmA	ALA	Rep, Mult	588,591
9	0.02	1	3fxiA	UUU	Rep, Mult	768,803,808
10	0.02	1	3f35A	DIE	Rep, Mult	790,810
11	0.02	1	3ic3D	BGC	Rep, Mult	800,804
12	0.02	1	5hluA	NO	Rep, Mult	591,606
13	0.02	1	3d1nP	NUC	Rep, Mult	754,766
14	0.02	1	3kndA	III	Rep, Mult	508,514,547,550,553,554,586,589
15	0.02	1	1f59B	III	Rep, Mult	488,492,495,496,528,532
16	0.02	1	4gqtA	ZN	Rep, Mult	433,437
17	0.02	1	3ug6A	MG	Rep, Mult	56,91
18	0.02	1	2z64A	UUU	Rep, Mult	118,149,155
19	0.02	1	2bptA	III	Rep, Mult	451,452,455,456,484,486,487,488,489,491,492,493,520,522,525,526
20	0.02	1	2ot8A	III	Rep, Mult	719,727,758,761,762,765

	Download the all possible binding ligands and detailed prediction summary.
	Download the templates clustering results.
(a)	C-score is the confidence score of the prediction. C-score ranges [0-1], where a higher score indicates a more reliable prediction.
(b)	Cluster size is the total number of templates in a cluster.
(c)	Lig Name is name of possible binding ligand. Click the name to view its information in the BioLiP database.
(d)	Rep is a single complex structure with the most representative ligand in the cluster, i.e., the one listed in the Lig Name column. Mult is the complex structures with all potential binding ligands in the cluster.

Enzyme Commission (EC) numbers and active sites

Rank	Cscore^EC	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	EC Number	Active Site Residues
1	0.060	1z1wA	0.304	6.63	0.025	0.409	3.4.11.-	NA
2	0.060	2gv9B	0.295	8.56	0.050	0.462	2.7.7.7	786,799
3	0.060	2vdcA	0.360	8.72	0.038	0.582	1.4.1.13	NA
4	0.060	3dpyA	0.282	5.17	0.063	0.349	2.5.1.58,2.5.1.59	NA
5	0.060	2zxqA	0.323	8.69	0.034	0.517	3.2.1.97	285
6	0.060	2vkzG	0.317	9.26	0.044	0.537	2.3.1.38,3.1.2.14	NA
7	0.060	2uv8G	0.321	8.87	0.037	0.531	2.3.1.86	NA
8	0.060	2pffB	0.313	9.32	0.043	0.531	2.3.1.86	216,233
9	0.060	1slyA	0.280	7.74	0.043	0.419	4.2.2.-	111,116,118
10	0.060	1ho8A	0.285	6.23	0.065	0.385	3.6.3.14	268,334,351
11	0.060	2pdaA	0.298	9.10	0.044	0.495	1.2.7.1	NA
12	0.060	2vdcF	0.351	8.78	0.039	0.569	1.4.1.13	NA
13	0.060	3hkzJ	0.284	8.63	0.048	0.454	2.7.7.6	212,272
14	0.060	1ea0A	0.358	8.93	0.048	0.587	1.4.1.13	NA
15	0.060	1fo4A	0.309	8.77	0.049	0.495	1.17.1.4	NA
16	0.060	1ej6A	0.285	8.50	0.033	0.450	2.7.7.50	NA
17	0.060	3gtgB	0.289	8.92	0.037	0.475	2.7.7.6	193,203
18	0.060	3ffzA	0.301	8.73	0.027	0.482	3.4.24.69	NA
19	0.060	2e1qA	0.307	8.89	0.062	0.499	1.17.3.2,1.17.1.4	NA

(a)	Cscore^EC is the confidence score for the EC number prediction. Cscore^EC values range in between [0-1]; where a higher score indicates a more reliable EC number prediction.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

Gene Ontology (GO) terms

Rank	Cscore^GO	TM-score	RMSD^a	IDEN^a	Cov	PDB Hit	Associated GO Terms
Homologous GO templates in PDB
0	0.15	0.521	7.10	0.06	0.72	1qgkA	GO:0000059 GO:0000060 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006309 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0007079 GO:0007080 GO:0008139 GO:0008270 GO:0008536 GO:0008565 GO:0015031 GO:0016020 GO:0016032 GO:0019054 GO:0019899 GO:0019904 GO:0030953 GO:0031291 GO:0031965 GO:0034399 GO:0040001 GO:0043234 GO:0044822 GO:0045184 GO:0051879 GO:0070062 GO:0071782 GO:0075733 GO:0090307
1	0.12	0.593	6.81	0.05	0.82	3zkvA	GO:0005737 GO:0006606 GO:0006886 GO:0007270 GO:0008139 GO:0008536 GO:0008565 GO:0031965 GO:0042331 GO:0050804
2	0.07	0.631	6.62	0.07	0.85	4ol0B	GO:0004872 GO:0005634 GO:0005737 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0031965 GO:0035048 GO:0042802 GO:0043231
3	0.07	0.603	6.78	0.06	0.83	2xwuB	GO:0005634 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0008139 GO:0008536 GO:0008565 GO:0015031 GO:0031965
4	0.07	0.625	6.65	0.07	0.84	4c0qA	GO:0004872 GO:0005634 GO:0005737 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0031965 GO:0035048 GO:0042802 GO:0043231
5	0.07	0.649	6.46	0.06	0.87	2x1gF	GO:0005737 GO:0006606 GO:0006886 GO:0007270 GO:0008139 GO:0008536 GO:0008565 GO:0031965 GO:0042331 GO:0050804
6	0.07	0.611	7.26	0.06	0.87	3wyfC	GO:0000055 GO:0000776 GO:0005634 GO:0005737 GO:0005816 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0008536 GO:0008565 GO:0015031 GO:0034501 GO:0048471
7	0.07	0.581	6.98	0.07	0.81	3zjyE	GO:0005634 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0008139 GO:0008536 GO:0008565 GO:0015031 GO:0031965
8	0.07	0.568	6.17	0.06	0.73	4xriA	GO:0005622 GO:0006886 GO:0008536
9	0.07	0.567	7.68	0.07	0.83	5difC	GO:0000055 GO:0000776 GO:0005634 GO:0005737 GO:0005816 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0008536 GO:0008565 GO:0015031 GO:0034501 GO:0048471
10	0.07	0.534	6.78	0.07	0.73	2q5dB	GO:0000059 GO:0000060 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006309 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0007079 GO:0007080 GO:0008139 GO:0008270 GO:0008536 GO:0008565 GO:0015031 GO:0016020 GO:0016032 GO:0019054 GO:0019899 GO:0019904 GO:0030953 GO:0031291 GO:0031965 GO:0034399 GO:0040001 GO:0043234 GO:0044822 GO:0045184 GO:0051879 GO:0070062 GO:0071782 GO:0075733 GO:0090307
11	0.07	0.546	6.44	0.07	0.73	3nd2A	GO:0000059 GO:0000060 GO:0000176 GO:0005087 GO:0005634 GO:0005643 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006612 GO:0006656 GO:0006810 GO:0006886 GO:0008139 GO:0008536 GO:0008565 GO:0015031 GO:0031965 GO:0034399 GO:0043547 GO:0051028 GO:0051292 GO:0060188
12	0.07	0.534	6.19	0.09	0.70	4c0qB	GO:0004872 GO:0005634 GO:0005737 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0031965 GO:0035048 GO:0042802 GO:0043231
13	0.06	0.360	4.75	0.10	0.43	4uadA	GO:0005634 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006606 GO:0006607 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0016020 GO:0045944 GO:0060135
14	0.06	0.350	5.03	0.09	0.43	4b8jA	GO:0005634 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006606 GO:0006607 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0016032 GO:0048471
15	0.06	0.353	4.85	0.09	0.43	4rxhB	GO:0005634 GO:0005737 GO:0006606 GO:0006810 GO:0008565 GO:0015031
16	0.06	0.348	5.31	0.08	0.43	1wa5B	GO:0000176 GO:0005634 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006606 GO:0006607 GO:0006612 GO:0006810 GO:0008139 GO:0008565 GO:0015031 GO:0031144 GO:0048471
17	0.06	0.279	6.54	0.04	0.38	2iw3B	GO:0000166 GO:0001933 GO:0003723 GO:0003746 GO:0005524 GO:0005737 GO:0005840 GO:0006412 GO:0006414 GO:0006415 GO:0006469 GO:0010494 GO:0016887 GO:0019843 GO:0022626 GO:0042788
18	0.06	0.221	7.73	0.05	0.32	2hivA	GO:0000166 GO:0003677 GO:0003909 GO:0003910 GO:0005524 GO:0005737 GO:0006260 GO:0006273 GO:0006281 GO:0006310 GO:0006974 GO:0007049 GO:0016874 GO:0046872 GO:0051103 GO:0051301 GO:0071897

Consensus prediction of GO terms

Molecular Function	GO:0008139	GO:0008565	GO:0008536
GO-Score	0.40	0.40	0.30
Biological Processes	GO:0006606
GO-Score	0.30
Cellular Component	GO:0005737	GO:0031965
GO-Score	0.40	0.40

(a)	Cscore^GO is a combined measure for evaluating global and local similarity between query and template protein. It's range is [0-1] and higher values indicate more confident predictions.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.
(f)	The second table shows a consensus GO terms amongst the top scoring templates. The GO-Score associated with each prediction is defined as the average weight of the GO term, where the weights are assigned based on Cscore^GO of the template.

[Click on result.tar.bz2 to download the tarball file including all modelling results listed on this page]

Please cite the following articles when you use the I-TASSER server:
1.	J Yang, R Yan, A Roy, D Xu, J Poisson, Y Zhang. The I-TASSER Suite: Protein structure and function prediction. Nature Methods, 12: 7-8, 2015.
2.	J Yang, Y Zhang. I-TASSER server: new development for protein structure and function predictions, Nucleic Acids Research, 43: W174-W181, 2015.
3.	A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738, 2010.
4.	Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40, 2008.