Threading Zmax Znorm MUSTER 5.78 1.00 dPPAS 9.74 1.05 wdPPAS 16.88 1.82 wMUSTER 8.27 1.43 wPPAS 12.12 1.73 dPPAS2 23.70 2.26 PPAS 9.35 1.34 Env-PPAS 9.59 1.20 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=5514) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -1.39 0.54+-0.15 6.2+-3.8 3823 0.169 model2 -2.21 1638 0.074 model3 -4.03 207 0.012 model4 -2.72 1031 0.044 model5 -5.00 98 0.004 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).