Threading Zmax Znorm MUSTER 26.98 4.65 dPPAS 77.35 8.32 wdPPAS 115.42 12.41 wMUSTER 41.72 7.19 wPPAS 99.34 14.19 dPPAS2 125.92 11.99 PPAS 83.86 11.98 Env-PPAS 12.33 1.54 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=1920) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -1.73 0.50+-0.15 13.1+-4.1 213 0.020 model2 -1.91 172 0.016 model3 -1.88 153 0.017 model4 -2.38 148 0.010 model5 -1.90 135 0.017 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).