Threading Zmax Znorm MUSTER 6.92 1.19 dPPAS 8.78 0.94 wdPPAS 9.76 1.05 wMUSTER 6.24 1.08 wPPAS 5.83 0.83 dPPAS2 15.30 1.46 PPAS 8.60 1.23 Env-PPAS 15.72 1.97 ================================================================== | Estimated accuracy of your models | ================================================================== Estimated Clusters (N=1803) --------------------- ------------------ Model# C-score TM-score RMSD (A) #decoys density ------ ------- ---------- -------- ------- ------- model1 -2.28 0.45+-0.14 14.6+-3.6 666 0.084 model2 -3.70 178 0.020 model3 -3.61 158 0.022 model4 -3.92 120 0.016 model5 -3.81 120 0.018 C-score is a confidence score of the I-TASSER predictions which is typically in [-5,2]. TM-score and RMSD measure how close the model is to the native structure and both are estimated based on the C-score. TM-score is in [0,1] with a value >0.5 implying the model of correct topology. The TM-score and RMSD estimations are made only for the first model because absolute values of TM-score and RMSD for the lower-rank models do not strongly correlate with the C-score. The models are ranked based on the structure density of I-TASSER simulations. Please cite following articles when you use the I-TASSER Suite: 1. Y Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9: 40 (2008). 2. A Roy, A Kucukural, Y Zhang. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols, 5: 725-738 (2010). 3. J Yang, A Roy, Y Zhang. Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment. Bioinformatics, 29:2588-2595 (2013).